Comparative Biochemistry

University of California, Berkeley

This is an archived copy of the 2015-16 guide. To access the most recent version of the guide, please visit http://guide.berkeley.edu.

Overview

The interdisciplinary Graduate Group in Comparative Biochemistry administers the PhD degree for students interested in a biochemical and molecular approach to problems in the biological sciences. Students work under the supervision of faculty from diverse disciplines, including Molecular and Cell Biology; Nutritional Science and Toxicology; Plant and Microbial Biology; Chemistry; Chemical Engineering; Environmental Science, Policy, and Management; Public Health; and the Lawrence Berkeley National Laboratory.

Undergraduate Program

There is no undergraduate program in Comparative Biochemistry.

Graduate Program

Comparative Biochemistry : PhD

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Courses

Comparative Biochemistry

COMPBIO 294 Comparative Biochemistry Seminar 1 Unit

Terms offered: Fall 2017, Fall 2016, Fall 2015
The objective of this course is to provide an overview of the research activities conducted by faculty members of the Graduate Group in Comparative Biochemistry. The lectures will cover a wide range of interdisciplinary research topics reflecting the breadth of the Group. An important goal of this course is to enhance intellectual and collaborative interactions between students and faculty of the Graduate Group by increasing awareness of the range
of research projects. The course will be conducted in a seminar format and is required for students new to the Graduate Group. It is also recommended for advanced students currently in the Group.

COMPBIO 299 Graduate Research 1 - 12 Units

Terms offered: Fall 2017, Summer 2017 8 Week Session, Spring 2017
Graduate student research.

Faculty and Instructors

Faculty

Carolyn R. Bertozzi, Professor. Molecular basis of cell surface interactions, eukaryotic genomes, glycosylation.
Research Profile

Steven Brenner, Professor. Molecular biology, computational biology, evolutionary biology, bioengineering, structural genomics, computational genomics, cellular activity, cellular functions, personal genomics.
Research Profile

George A. Brooks, Professor. Exercise & environmental physiology, metabolism, lactate shuttle, crossover concept, lactate, lactic acidosis, traumatic brain injury, obesity, diabetes, the Warburg Effect in cancer, aging biology, isotope tracer technology, arterial-venous difference measurements, clamp technology, muscle biopsies, cell culture, mitochondrial biogenesis, energy substrate partitioning, carbohydrate metabolism, lipid metabolism, fatty acid reesterification, menopause.
Research Profile

Bob B. Buchanan, Professor. Biotechnology, environmental policy, plant biology, thioredoxin.
Research Profile

John E. Casida, Professor. Pesticides, insect biology, environmental science, pest management, molecular toxicology.
Research Profile

Ben De Lumen, Professor. Cancer prevention, academic enterpreneurship.
Research Profile

Peter H. Duesberg, Professor. Genetic structure of retroviruses, carcinogenesis, aneuploidy, virology, HIV-AIDS.
Research Profile

Lin He, Assistant Professor.

Ian Holmes, Assistant Professor. Computational biology.
Research Profile

Sung-Hou Kim, Professor. Computational genomics, Structural Biology, drug discovery, disease genomics.
Research Profile

Jack F. Kirsch, Professor. Enzymology, directed evolution, drug discovery.
Research Profile

Isao Kubo, Professor. Agriculture, insect biology, pest management.
Research Profile

John Kuriyan, Professor. Structural and functional studies of signal transduction, DNA replication, cancer therapies, phosphorylation.
Research Profile

Lexin Li, Associate Professor.

Stuart M. Linn, Professor. Biology, enzymology of DNA metabolism, DNA repair and replication in mammalian cells, mechanisms of DNA damage by reactive oxygen species, structure of iron: DNA complexes, DNA damage and repair, DNA polymerases.
Research Profile

Fenyong Liu, Professor. Public health, infectious diseases.
Research Profile

Anastasios Melis, Professor. Photosynthesis, Metabolic Engineering, bioenergy.
Research Profile

Daniel S. Rokhsar, Professor. Biology, collective phenomena and ordering in condensed matter and biological systems, theoretical modeling, computational modeling, behavior of quantum fluids, cold atomic gases, high temperature superconductors, Fermi and Bose systems.
Research Profile

Randy W. Schekman, Professor. Saccharomyces cerevisiae, organelle assembly, intracellular protein transport, assembly of cellular organelles, Alzheimer's Disease.
Research Profile

Barry Shane, Professor. Plant biology, health and nutrition, nutritional sciences and toxicology.
Research Profile

Martyn T. Smith, Professor. Cancer, genomics, toxicology, molecular epidemiology, exposome.
Research Profile

Yun Song, Associate Professor. Computational biology, population genomics, applied probability and statistics.
Research Profile

Hei Sook Sul, Professor. Plant biology, health and nutrition, nutritional sciences & toxicology.
Research Profile

Christopher D. Vulpe, Professor. Genetics, genomics, ecotoxicology, gene expression, water quality, copper, iron, toxicology, susceptibility, environmental, ecotoxicogenomics.
Research Profile

Nir Yosef, Assistant Professor. Computational biology.
Research Profile

Emeritus Faculty

Bruce N. Ames, Professor Emeritus. Molecular biology, cancer, aging, mitochondrial decay, oxidants and antioxidants, micronutrient deficiencies and DNA damage, chronic inflammation and cancer.
Research Profile

Nancy Amy, Professor Emeritus. Nutritional science and toxicology, nutrition, cell metabolism, trace elements.
Research Profile

George W. Chang, Professor Emeritus. Microbial biology, health and nutrition, food safety.
Research Profile

Sung-Hou Kim, Professor Emeritus. Computational genomics, Structural Biology, drug discovery, disease genomics.
Research Profile

Montgomery Slatkin, Professor Emeritus. Evolutionary theory, genetic evolution, natural populations of plants and animals populations, human populations, natural selection structure genomes.
Research Profile

Contact Information

Graduate Group in Comparative Biochemistry

324 Barker Hall

Phone: 510-643-1711

compar.biochem@berkeley.edu

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Group Chair

Fenyong Liu, PhD (School of Public Health)

liu_fy@berkeley.edu

Head Graduate Adviser

Andreas Stahl

Phone: 510-642-6900

astahl@berkeley.edu

Graduate Student Affairs Officer

Phong Trang

324 Barker Hall MC #7354

Phone: 510-643-1711

Fax: 643-0896

compar.biochem@berkeley.edu

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