About the Program

The Graduate Program in Plant Biology is designed to train students in modern research areas of plant biology. Students' courses of study are designed individually, in light of their interests and career goals. The graduate program features an introductory seminar (Faculty Research Review), six five-week core course modules, and additional special topic courses and seminars in areas of faculty specialties. The department has research expertise in the following areas: molecular, cellular, genetic, biochemical, physiological, developmental, and structural biology, and plant-microbe interactions. The core courses cover plant developmental genetics, genomics and computational biology, plant diversity and evolution, plant cell biology, plant biochemistry, and plant systems biology.

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Admissions

Admission to the University

Uniform minimum requirements for admission

The following minimum requirements apply to all programs and will be verified by the Graduate Division:

1. A bachelor’s degree or recognized equivalent from an accredited institution;
2. A minimum grade-point average of B or better (3.0);
3. If the applicant comes from a country or political entity (e.g. Quebec) where English is not the official language, adequate proficiency in English to do graduate work, as evidenced by a TOEFL score of at least 570 on the paper-and-pencil test, 230 on the computer-based test, 90 on the iBT test, or an IELTS Band score of at least 7 (note that individual programs may set higher levels for any of these); and
4. Enough undergraduate training to do graduate work in the given field.

Applicants who already hold a graduate degree

The Graduate Council views academic degrees as evidence of broad research training, not as vocational training certificates; therefore, applicants who already have academic graduate degrees should be able to take up new subject matter on a serious level without undertaking a graduate program, unless the fields are completely dissimilar.

Programs may consider students for an additional academic master’s or professional master’s degree if the additional degree is in a distinctly different field.

Applicants admitted to a doctoral program that requires a master’s degree to be earned at Berkeley as a prerequisite (even though the applicant already has a master’s degree from another institution in the same or a closely allied field of study) will be permitted to undertake the second master’s degree, despite the overlap in field.

The Graduate Division will admit students for a second doctoral degree only if they meet the following guidelines:

1. Applicants with doctoral degrees may be admitted for an additional doctoral degree only if that degree program is in a general area of knowledge distinctly different from the field in which they earned their original degree. For example, a physics PhD could be admitted to a doctoral degree program in music or history; however, a student with a doctoral degree in mathematics would not be permitted to add a PhD in statistics.
2. Applicants who hold the PhD degree may be admitted to a professional doctorate or professional master’s degree program if there is no duplication of training involved.

Applicants may only apply to one single degree program or one concurrent degree program per admission cycle.

Any applicant who was previously registered at Berkeley as a graduate student, no matter how briefly, must apply for readmission, not admission, even if the new application is to a different program.

Required documents for admissions applications

1. Transcripts:  Upload unofficial transcripts with the application for the departmental initial review. Official transcripts of all college-level work will be required if admitted. Official transcripts must be in sealed envelopes as issued by the school(s) you have attended. Request a current transcript from every post-secondary school that you have attended, including community colleges, summer sessions, and extension programs.
   If you have attended Berkeley, upload unofficial transcript with the application for the departmental initial review. Official transcript with evidence of degree conferral will not be required if admitted.
2. Letters of recommendation: Applicants can request online letters of recommendation through the online application system. Hard copies of recommendation letters must be sent directly to the program, not the Graduate Division.
3. Evidence of English language proficiency: All applicants from countries in which the official language is not English are required to submit official evidence of English language proficiency. This requirement applies to applicants from Bangladesh, Burma, Nepal, India, Pakistan, Latin America, the Middle East, the People’s Republic of China, Taiwan, Japan, Korea, Southeast Asia, and most European countries. However, applicants who, at the time of application, have already completed at least one year of full-time academic course work with grades of B or better at a U.S. university may submit an official transcript from the U.S. university to fulfill this requirement. The following courses will not fulfill this requirement: 1) courses in English as a Second Language, 2) courses conducted in a language other than English, 3) courses that will be completed after the application is submitted, and 4) courses of a non-academic nature. If applicants have previously been denied admission to Berkeley on the basis of their English language proficiency, they must submit new test scores that meet the current minimum from one of the standardized tests.

Admission to the Program

Prospective students for the graduate program in plant biology are expected to demonstrate academic excellence and potential for independent scientific research. Students are expected to have a basic background in chemistry, physics, mathematics, and biology equivalent to those in the undergraduate program. An admissions committee composed of nine to ten members of the department will review applications and make recommendations to the full department on admissions matters. Recommendations for admission will be based on a demonstration of academic excellence and potential for independent scientific research as shown by grades in university-level undergraduate and graduate courses, letters of recommendation, written statements of academic and professional goals, and other evidence of academic accomplishment. Scores on standardized tests, such as the Graduate Record Examination (GRE), will be required of all applicants. Students seeking detailed information about matters such as admission, curriculum, and courses of financial support should contact the student affairs adviser or the graduate adviser.

Doctoral Degree Requirements

Normative Time Requirements

Normative Time to Advancement

Normative time to advancement to PhD candidacy is 2 years

Year 1
Students perform three laboratory rotations in order to explore areas of research interest and identify a faculty mentor, dissertation project and laboratory. Students undertake required core classes and attend seminars of interest.

Year 2
Students attend seminars, perform their first teaching assignment, and prepare for the PhD qualifying exam which consists of two research proposals and an oral examination. With the successful passing of the qualifying exam, students select a dissertation committee and advance to candidacy for the PhD degree prior to the start of the 5^th semester.

Normative Time in Candidacy 

Years 3 – 5/5.5
Students attend seminars of interest and perform their second teaching assignment. Students conduct original laboratory research for the PhD dissertation with the guidance of their faculty mentor and a self-selected 3 to 4 person dissertation committee. Students are required to meet annually with the dissertation committee. Students write the dissertation based on the results of their research. Upon approval of the dissertation by the dissertation committee and Graduate Division, students are awarded the doctorate. There is no formal defense of the completed dissertation; however, students are expected to publicly present a talk about their research in the final year.

Total Normative Time

Total Normative Time to Degree is 5 – 5.5 years.

Time to Advancement

Curriculum

Professional Development

Research Presentations

All plant biology graduate students attend the Plant & Microbial Biology (PMB) department retreat at least once during their graduate studies. Students are encouraged to attend both the Plant & Microbial Biology department retreat and the Graduate Group in Microbiology retreat and present their research. Students are highly encouraged to present during the PMB department student/post-doc seminar series. They are also encouraged to attend national and international conferences to present research. 

Teaching

Plant biology graduate students are required to teach two semesters. Students are required to teach in two distinctly different classroom settings; specifically, teaching in a “large” enrollment course (100+) and a “small” upper division, lab, or low enrollment (< 100) course.

Grant Writing

Students are encouraged to take PLANTBI 297 Grant Writing and Research Presentations.

Courses

Plant Biology

Faculty

Professors

Steven E. Brenner, Professor. Molecular biology, computational biology, evolutionary biology, bioengineering, structural genomics, computational genomics, cellular activity, cellular functions, personal genomics.
Research Profile

Thomas D. Bruns, Professor. Microbial biology, plant biology, fungi, nucleic acid sequences, basidomycetes, ectomycorrhizal fungi communities.
Research Profile

John D Coates, Professor.

Lewis J Feldman, Professor. Microbial biology, plant biology.
Research Profile

Robert L. Fischer, Professor. Plant and microbial biology.
Research Profile

N. Louise Glass, PhD, Professor. Biotechnology, plant and microbial biology.
Research Profile

Andrew Otis Jackson, PhD, Professor.

Steven E. Lindow, Professor. Microbial ecology, microbial biology, plant biology, plant frost control, bacterial plant diseases, plant disease epidemiology.
Research Profile

Sheng Luan, Professor. Microbial biology, plant biology.
Research Profile

Anastasios Melis, PhD, Professor. Bioenergy, biophysics, biofuels, enzymology, photosynthesis.
Research Profile

Krishna K. Niyogi, PhD, Professor. Genetics, plant and microbial biology, algae, photosynthesis, antioxidants.
Research Profile

Peter Quail, Professor. Plant biology, plant and microbial biology.
Research Profile

Chris Somerville, Professor. Biochemistry, biotechnology, bioenergy, cell biology, biofuels, cell walls, polysaccharides, cellulose, arabidopsis, cellulose synthase.
Research Profile

Shauna Somerville, PhD, Professor. Arabidopsis, cell wall integrity sensing, plant-fungal interactions, plant cell walls, powdery mildew diseases.
Research Profile

Brian J. Staskawicz, PhD, Professor. Biotechnology, plant and microbial biology.
Research Profile

Zinmay Renee Sung, PhD, Professor. Plant biology, plant and microbial biology.
Research Profile

John W. Taylor, PhD, Professor. Evolution, fungi, phylogenomics, mycology, population genomics.
Research Profile

Norman Terry, PhD, Professor. Environmental policy, water resources, plant biology, plant and microbial biology.
Research Profile

Patricia Zambryski, Professor. Microbial biology, plant biology, plant intercellular communication via plasmodesmata, Agrobacterium, bacterial type IV secretion.
Research Profile

Associate Professors

Britt Glaunsinger, PhD, Associate Professor. Virology, gene expression, RNA degradation, herpesvirus.
Research Profile

Arash Komeili, Associate Professor. Bacterial organelles.
Research Profile

Markus Pauly, PhD, Associate Professor. Cell walls, extracellular matrix, plants, polysaccharides, carbohydrates, lignin, nucleotide sugars, analytical carbohydrate chemistry, plant genomics, enzyme biochemistry.
Research Profile

Kathleen R. Ryan, PhD, Associate Professor. Bacterial cell biology and genetics, bacterial cell cycle regulation, two-component signal transduction, cell wall biogenesis.
Research Profile

Chelsea Specht, PhD, Associate Professor. Molecular evolution, adaptation, plant systematics, evolution of development (evo-devo), evolution of form and function, plant morphology, comparative phylogenetics, floral developmental evolution, diversification rates.
Research Profile

Mary Wildermuth, Associate Professor.

Daniel Zilberman, Associate Professor.

Assistant Professors

Michiko E. Taga, PhD, Assistant Professor. Molecular biology, genetics, microbial biology, chemical biology, cofactors, nutrient exchange, microbial communities.
Research Profile

Adjunct Faculty

Barbara J. Baker, Adjunct Faculty. Biochemistry, genetics, signal transduction, plant and microbial biology, biolomolecular mechanisms of plant resistance to microbial disease, plant pathogen recognition, plant resistance to pathogen diseases, tobacco mosaic virus, agriculture and crops.
Research Profile

Jennifer C. Fletcher, PhD, Adjunct Faculty. Molecular biology, genetics, gene regulation, stem cells, plant development.
Research Profile

Igor V Grigoriev, Adjunct Faculty.

Sarah Hake, PhD, Adjunct Faculty.

Frank G Harmon, PhD, Adjunct Faculty.

Janet Jansson, Adjunct Faculty.

Jennifer D Lewis, PhD, Adjunct Faculty.

Sheila Mccormick, PhD, Adjunct Faculty. Molecular biology, genetics, pollen, plant reproduction.
Research Profile